Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIKQAIIKL-ETILENGNAIESGSFVKY----SVIKNILSLLEKDQELKIIEMKVELNGVEDSIENATLLEKRLIEAKS-----LVEDLASTINSLEIKVK
1C54 Chain:A ((1-96))
DVSGTVCLSALPPEATDTLNLIASDGPFPYSQDGVVFQNRESVLPTQSYGYYHEYTVITPGARTR------GTRRIITGEATQEDYYTGDHYATFSLIDQTC-
General information:
TITO was launched using:
RESULT:
Template:
1C54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7652 for 558 contacts (-13.7/contact) +
2D Compatibility (PS) -8559 + (NN) 5960 + (LL) 664
1D Compatibility (HY) -800 + (ID) 800
Total energy: -11187.0 ( -20.05 by residue)
QMean score : 0.063
(partial model without unconserved sides chains):
PDB file :
Tito_1C54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C54-query.scw
PDB file :
Tito_Scwrl_1C54.pdb
: