Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAKIAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFSTSFTEPFTLARQLSSLDHISSGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVRGLWNSWEEDAFTYNKETGEFFNPEKLHHLNHQGEYFQVEG-PLNIGRSKQGEPVVFQAGASSTGRDFAAQNAEAIFTHSDSLEEAVEFYRDVKSRAEKAGRNADEVRIFPGISPIVADTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQSTTDRIKKEAKERHLTLRQVATEA------ATPKTPFIGTKEQVADLIEVWFQNEAADGFII-ASDIPGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQAVETK |
| 3SDO Chain:A ((5-445)) | -MTRKHIHFGVLIQGAGANMNAWKHPSVPPDASVNFDFYVDRARRAENAGIAFAFIADSAYVTPKSAPHFLNRFEPISLLSALAVLTSKIGLVGTMSSSYSEPYNVARQFASLDLISGGRAGWNVVTSSIEGTGKNYGRP-HPDHAQRYAIAAEHLDVVQGLWDSWDDDALVRDRATGRFFDPDKLHRLDHRGRFFSVEGPLNIRRSPQ-GQPVIFQAGSSDDGIDLAGRSADAVFSNGSTFDEARVFYRRVKAAAAAAGRNPDHVKVFPGIGPIVGATQQEADDKYRQVRDLLSPREALAYLSHFFQQHDFSVYPLDGPFPDIGTLGSDGFQSTTDNIKRLARERKLTLREVAYEVSTRRSNIGTSEAFIGTPEAVASEMIRWVDEGAADGFMLGLPVTGFGLDDFVDHVLPVLSARGYFDPVRRGATLRDHLGLPYKESRYA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161919 for 3674 contacts (-44.1/contact) +
2D Compatibility (PS) -46962 + (NN) -28105 + (LL) 660
1D Compatibility (HY) -36400 + (ID) 10300
Total energy: -283026.0 ( -77.03 by residue)
QMean score : 0.523
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