Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIVL--VCAAGMSTSLLV-TKMRKAAEERGETCEIEAYSIAEVSN-----LIDDADVVLLGPQVRY-QKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGFQK
2M1Z Chain:A ((2-104))
KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFD-----GKVVLEVPVSA-PIKDAEKVINAALALID----
General information:
TITO was launched using:
RESULT:
Template:
2M1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57094 for 722 contacts (-79.1/contact) +
2D Compatibility (PS) -10241 + (NN) -2085 + (LL) 632
1D Compatibility (HY) -5600 + (ID) 1100
Total energy: -75488.0 ( -104.55 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2M1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M1Z-query.scw
PDB file :
Tito_Scwrl_2M1Z.pdb
: