Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENF--VTHSKNGY-YDGLIFHRVIPEFMIQGGD-PDGRGTGGESIWGESFEDEFSTEAFNLRGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
1XQ7 Chain:B ((20-165))
-----------------------GRVVIGLFGNDVPKTVENFKQLASGENGFGYKGSIFHRVIRNFMIQGGDFTNFDGTGGKSIYGTRFDDE-NLKIKHFVGAVSMANAGPNSNGSQFFVTTAP---------------------------TPWLDGRHVVFGKVVEGMDVVKKVENTKTGLNDKPKKAVKINDCGV-
General information:
TITO was launched using:
RESULT:
Template:
1XQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45799 for 1049 contacts (-43.7/contact) +
2D Compatibility (PS) -15189 + (NN) -9216 + (LL) 3764
1D Compatibility (HY) -13200 + (ID) 4050
Total energy: -83690.0 ( -79.78 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ7-query.scw
PDB file :
Tito_Scwrl_1XQ7.pdb
: