Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGI-AVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
1Y9I Chain:A ((6-164))
---KQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELDICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNE-HDGIAVHTFLDDIVGAIAAAAASRLAHSYHD----
General information:
TITO was launched using:
RESULT:
Template:
1Y9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106378 for 1300 contacts (-81.8/contact) +
2D Compatibility (PS) -17291 + (NN) -9150 + (LL) 788
1D Compatibility (HY) -23200 + (ID) 7700
Total energy: -162931.0 ( -125.33 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1Y9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y9I-query.scw
PDB file :
Tito_Scwrl_1Y9I.pdb
: