Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIHQYFQSLSDLENIYR--CPGKFKYQEHSVAEHSYKVTSIAQFFGAVEEEAGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKNFIEREIPETYQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFVEIYSEALATIYEYREMASVKYFLKEILPDMLAEKGIEKTELPQLTTEITTKALRDA
2CQZ Chain:A ((4-171))
--MIEKILLVQTLKRLPRMGWLIKGVQEPESIADHSFGVAFITLVLADVLEKRGKRIDVEKALKMAIVHDLAEAIITDIPLSAQEFVDK-----DKAEALVFK-----KVFPEFYELYREYQ---ECSSPEAQLVRIADKLDMILQAYQYELSGNKN--LDEFWEAIE-EIKR----LELSKYLEDILNS---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CQZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13313 for 1242 contacts (-10.7/contact) +
2D Compatibility (PS) -17614 + (NN) -6539 + (LL) 4480
1D Compatibility (HY) -11200 + (ID) 1800
Total energy: -45986.0 ( -37.03 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_2CQZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQZ-query.scw
PDB file :
Tito_Scwrl_2CQZ.pdb
: