Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFT-EKVVLHIFVDNDEL-QDFFNWITEISNGQLEYKEGPQKYREKDVT
3CB4 Chain:D ((399-480))----------------------------------------------------------------------------------------------------------------------------------LREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDM-


General information:
TITO was launched using:
RESULT:

Template: 3CB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32723 for 554 contacts (-59.1/contact) +
2D Compatibility (PS) -8483 + (NN) 139 + (LL) 9112
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -35405.0 ( -63.91 by residue)
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3CB4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CB4-query.scw
PDB file : Tito_Scwrl_3CB4.pdb: