Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFT-EKVVLHIFVDNDEL-QDFFNWITEISNGQLEYKEGPQKYREKDVT |
3CB4 Chain:D ((399-480)) | ----------------------------------------------------------------------------------------------------------------------------------LREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32723 for 554 contacts (-59.1/contact) +
2D Compatibility (PS) -8483 + (NN) 139 + (LL) 9112
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -35405.0 ( -63.91 by residue)
QMean score : 0.511
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