Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKDVGIDLGTANVLIHVKGRGI---------VVNEPAVVAINNKTGQVLAVGTEARDMVGRTPGDITAI--------------------KPMK-----DG-------------VIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCPTNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIF-------EPSGNMIIDIGGGTADVAVLSMGD--I--V-TSQSVKVAGNKWDADILNYVKRKYNLLI-------------GERTAENIKVTIGTACQGAKEEKMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDRGIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF |
| 3D2F Chain:A ((2-392)) | -STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGP---KNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTN----APFSV--ESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSA-EEV--DFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPT----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143209 for 2593 contacts (-55.2/contact) +
2D Compatibility (PS) -34085 + (NN) -14400 + (LL) 636
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -200808.0 ( -77.44 by residue)
QMean score : 0.453
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