Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG |
2EJW Chain:E ((4-283)) | ----LKIALLGGGTVGSAFYNLVLERAEELSAF-GVVPRFLGVLVRDPRKPRAIPQE--LLRAEPFDLL---EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEGL--IYHEASVMAGTPAL-SFLETLRGSELLELHGILNGTTLYILQEME-KGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGIARLTPEVLQKAEARGERVRLVASLFGEGGRWRAAVAPRRLPQDHPLA--RARGNALWVRARPLGEAF------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -177356 for 2277 contacts (-77.9/contact) +
2D Compatibility (PS) -30258 + (NN) -7259 + (LL) 9220
1D Compatibility (HY) -22800 + (ID) 5150
Total energy: -233603.0 ( -102.59 by residue)
QMean score : 0.453
|
|
|