Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTH--SLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDN-----GDGLA----FNKLPS---NTPQLDYFI---DKKTKIST-DLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSE-SIEKTHWFLEKSSPEKKEIKLISK |
| 3PFB Chain:A ((44-265)) | -------------------------------------EIYDMAIIFHGFTANRNTSLLREIANSLRDE-NIA--SVRFDFNGHGDSDG----------K-------FENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD-----LIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHG------TDDTVVSPNASKKYDQIYQN----STLHLI--EGADHCFSDSYQKNAVNLTTDFLQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34507 for 1715 contacts (-20.1/contact) +
2D Compatibility (PS) -21502 + (NN) -6282 + (LL) 5468
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: -61373.0 ( -35.79 by residue)
QMean score : 0.322
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