Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF
3DL0 Chain:B ((1-215))
MNLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLGGL
General information:
TITO was launched using:
RESULT:
Template:
3DL0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63207 for 1659 contacts (-38.1/contact) +
2D Compatibility (PS) -23380 + (NN) -14525 + (LL) 0
1D Compatibility (HY) -25200 + (ID) 7400
Total energy: -133712.0 ( -80.60 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_3DL0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL0-query.scw
PDB file :
Tito_Scwrl_3DL0.pdb
: