Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYTPRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAINKRTSHITVVVSEVKEG
3J7Z Chain:S ((11-109))
---------------RSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD----
General information:
TITO was launched using:
RESULT:
Template:
3J7Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59826 for 672 contacts (-89.0/contact) +
2D Compatibility (PS) -10488 + (NN) -430 + (LL) 1828
1D Compatibility (HY) -8400 + (ID) 2950
Total energy: -80266.0 ( -119.44 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Z-query.scw
PDB file :
Tito_Scwrl_3J7Z.pdb
: