Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMVESYHENGAYFVIAPQIAIPHARPTDG-VENSAVSLVVLKDGVNFGHAANDPVRLVFGLAATSSEAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
2OQ3 Chain:A ((5-146))
-DYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPE-CGALKTGMSLTLLEQGVYFPGND-EPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISR
General information:
TITO was launched using:
RESULT:
Template:
2OQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120254 for 1137 contacts (-105.8/contact) +
2D Compatibility (PS) -15542 + (NN) -9304 + (LL) 52
1D Compatibility (HY) -12000 + (ID) 2000
Total energy: -159048.0 ( -139.88 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2OQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQ3-query.scw
PDB file :
Tito_Scwrl_2OQ3.pdb
: