Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKRLVLIVEDEDGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDMEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQPSSKESPNDHIIRIQDLYIDDDRRLVKMDDTEIHFTPIEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEKNPAEPAYILTEVGVGYRMAEE
4L85 Chain:C ((6-120))
------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILALGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR--------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4L85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80514 for 892 contacts (-90.3/contact) +
2D Compatibility (PS) -12816 + (NN) -8481 + (LL) 8460
1D Compatibility (HY) -12000 + (ID) 2850
Total energy: -108201.0 ( -121.30 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_4L85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L85-query.scw
PDB file :
Tito_Scwrl_4L85.pdb
: