Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANLSELPNIGKVLEQDLIKA--GIKTPAELKD-VGSKEAFLRIWE-NDSSVCLSELCALEGAVQGIRWHDLDEAKKSELKKFHQSL
2AQ4 Chain:A ((241-304))
-FKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKLG-----MKIHLALQGQDDEESL-----------------
General information:
TITO was launched using:
RESULT:
Template:
2AQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15487 for 386 contacts (-40.1/contact) +
2D Compatibility (PS) -6508 + (NN) -1682 + (LL) 1800
1D Compatibility (HY) 1600 + (ID) 300
Total energy: -20577.0 ( -53.31 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_2AQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AQ4-query.scw
PDB file :
Tito_Scwrl_2AQ4.pdb
: