Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIMLMCNAGM-STSVLVRKMERVVEERNLELTIWAISETDFEKNWRKADAILLGPQVNYMKDKVIDTVGD-NVSVAVIDIVDYGRMNGEKVLDLAISLL
2L2Q Chain:A ((4-102))
SMNILLVCGAGMSTSMLVQ-RIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINTIDYGTMNGEKVLQLAINA-
General information:
TITO was launched using:
RESULT:
Template:
2L2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85609 for 681 contacts (-125.7/contact) +
2D Compatibility (PS) -10113 + (NN) -678 + (LL) 276
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -105874.0 ( -155.47 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_2L2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2Q-query.scw
PDB file :
Tito_Scwrl_2L2Q.pdb
: