Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHARSLLALETEEQQVALLAEIAENHWNVKQTEARIQEILGVKKQVATKKTKPKRQAISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQITIQIPKKK |
1VZ0 Chain:D ((23-208)) | -------------------------VVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRP-QGDGYELVAGERRYRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLEM-GLTQEEVARRVGKARSTVANALRLLQLPPEALEALERGEITAGHARALLMLEPEDRLWG-LKEILEKGLSVRQAEA---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67649 for 1209 contacts (-56.0/contact) +
2D Compatibility (PS) -20377 + (NN) -11153 + (LL) 7812
1D Compatibility (HY) -16000 + (ID) 4400
Total energy: -111767.0 ( -92.45 by residue)
QMean score : 0.670
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