Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQVGSLVEMKKPHACVIKETGKKANQWKVLRVGADIKIQ-CTNCQHVIMMSRYDFERKLKKVLQP
3MHS Chain:E ((70-88))
---------------------------------DKPIQYRVCEKCGKPLALTAIVDHLE-------
General information:
TITO was launched using:
RESULT:
Template:
3MHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6817 for 57 contacts (-119.6/contact) +
2D Compatibility (PS) -1776 + (NN) 1484 + (LL) 3476
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -5383.0 ( -94.44 by residue)
QMean score : -0.137
(partial model without unconserved sides chains):
PDB file :
Tito_3MHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MHS-query.scw
PDB file :
Tito_Scwrl_3MHS.pdb
: