Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLIETIEHFLAYSDDKLEELADKNYQLRQTIVEKEKIESREK
3WP8 Chain:A ((298-318))
---------------EDKIEEILSKIYHIENEIARIKKLIK---
General information:
TITO was launched using:
RESULT:
Template:
3WP8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3607 for 74 contacts (48.7/contact) +
2D Compatibility (PS) -2361 + (NN) -1530 + (LL) 1824
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -410.0 ( -5.54 by residue)
QMean score : 0.690
(partial model without unconserved sides chains):
PDB file :
Tito_3WP8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WP8-query.scw
PDB file :
Tito_Scwrl_3WP8.pdb
: