Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
3HVU Chain:D ((25-203))
MMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPHEFVVGYGLDYKEQYRNLPYVGVLKPSVYS-
General information:
TITO was launched using:
RESULT:
Template:
3HVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125829 for 1408 contacts (-89.4/contact) +
2D Compatibility (PS) -19579 + (NN) -6483 + (LL) 64
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -181027.0 ( -128.57 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_3HVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HVU-query.scw
PDB file :
Tito_Scwrl_3HVU.pdb
: