Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNQLIYTGKAKDIYSTKDENVIRTVYKDQATMLNGARKETIDGKGALNNQISSLIFEKLNMAGVVTHYIEQISKNEQLNKKVDIIPLEVVLRNVTAGSFSKRFGVEEGRVLETPIVEFYYKNDDLNDPFINDEHMKFLGIVNDEEIAYLKGETRRINELLKDWFAQIGLNLIDFKLEFGFDKDGKIILADEFSPDNCRLWDAEGNH-MDKDVFRRDLGSLTDVYQVVLEKLIAL
2YWV Chain:B ((7-236))--QQLLYEGKAKKIYATDEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAGIANHFIEKLSPTEQLVRRVTIIPLEVVVRNVVAGSLAKRIGLEEGTPLEAPLVEFYYKNDDLGDPLLLEDHIFILKLASREEVAALKQAALAVNDVLRLHFAERNVRLIDFKLEFGRTADGAILLADEISPDTCRLWDAKTNEKLDKDVFRRDLGSLTDAYEVILQRLGGE


General information:
TITO was launched using:
RESULT:

Template: 2YWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58440 for 1792 contacts (-32.6/contact) +
2D Compatibility (PS) -24497 + (NN) -4427 + (LL) 128
1D Compatibility (HY) -25200 + (ID) 6650
Total energy: -119086.0 ( -66.45 by residue)
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_2YWV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YWV-query.scw
PDB file : Tito_Scwrl_2YWV.pdb: