Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYY--QGNIIAGASSYSTYKNGIEI-EVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDAH---TRTSLNLSEKLGYEFSHEYIAYEID |
| 3LOD Chain:A ((46-138)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------TVIALAIRSPQGEAVGCGAIVLSEEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFAPYQPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30266 for 527 contacts (-57.4/contact) +
2D Compatibility (PS) -9338 + (NN) -4601 + (LL) 11320
1D Compatibility (HY) 400 + (ID) 650
Total energy: -33135.0 ( -62.87 by residue)
QMean score : 0.482
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