Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRTVAIDIGGTMIKHGIVDNLGCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDGIAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMHLSD----------GDFQDLASTTALIADVAKAHGDEISRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVFAQHENQAGMLGAYYHFKNRG |
| 2AA4 Chain:A ((1-289)) | -MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQ--AHAQRVAIASTGIIRDGSLLALNP-HNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALD-GDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELA----GADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLA-EGYLALVETYLAQEPA---AFHVDLLAAHYRHDAGLLGAALLAQGE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200007 for 2452 contacts (-81.6/contact) +
2D Compatibility (PS) -29687 + (NN) -8941 + (LL) 632
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -245953.0 ( -100.31 by residue)
QMean score : 0.426
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