Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MASGEKAKIQRKKSGAWSMTYKTL-D--G-NVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKM-F---DD-NPEHTMQFSKKKFANNMLNRDESTTNHSYDKV----LEGDLTPF--MGQFSSDSFNQTIVD--SGMTYGGYEPKDYYEGRTTVF-PAITKTGY-WNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANS--------GAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLIS--------LSYQSPDWWKR-----------------YKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTINDDGSTDDGERISIGSTE-KSRL---PSVGMSSGNFGVSVYL----------FQIGVS---NPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY----------------------------- |
| 3K5W Chain:A ((2-468)) | SLSVYEKVNALDKRAIEELFLSEDILMENAAMALERAVLQNASLGAKVIILCGSG---DNGGDGYALARRLVGRFRVLVFEMKLTKSPMCQLQKERAKKAGVVIKTYEENNLECDVLIDCVIGSHFKGKLEPFLNFESLSQKARFKIACDIPSGIDSKGRVDKRAFKADLTISMGAIKSCLLSDRAKDYVGELKVGHLGVFNPIYEIPTDTFLLEKSDLKLPLRDKKNAHKGDYGHAHVLLGKH---SGAGLLSALSALSFGSGVVSVQALECEITSNNKPLELVFCENFPNLLSAFALGMGLENIPKDFNRWLELAPCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLARDFSQKYPKVVLLLKGANTLIAHQGQVFINILGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINASLAHALASLEFKNNYALTPLDLIEKIKQLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28627 for 2791 contacts (10.3/contact) +
2D Compatibility (PS) -38236 + (NN) -3932 + (LL) 448
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: -23193.0 ( -8.31 by residue)
QMean score : 0.130
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