Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIKWFSLVRITGLLLVLLYHFFKNSFPGGFVGVDIFFTFSGFLITALLIDEFSKTKKIDFVSFCRRRFYRIFPPLVLMVLVTIPFVFLVKSDFRASIGSQIMTALGFTSNFYEILTGGNYESQFIPHLFVHTWSLSIEVHFYVLWGLTVWLLSKRSKDQKQLRGTLFLISMGVFGVSFLTMFVRAFFVDNFSTIYFSTLSHIFPFFLGAMVATISGIREITGRFKKNIKNLTLKHNLIMMGSAFAGLMILTFALDFDNRLTYLFGFVLSSIFASVMIYNARILHEHTPDISEPFVITYLADISYGMYLFHWPFYIIFSRLSPNWIAVILTVVLSAVFSTLSFYIIEPFILGRKPKFLDYEFDLLPYKKWLFSIGGVLTLITVVTMLTAPSIGSFETELLQNSLQQARTNTNRTHTLAAGDAGALSDVTVIGDSVALRSSAA--------------FNKLLP-EVQL--DAAVSRNFSK----------SFDIFENRIQNKALSKIVVLAVGVNSLDN---------------YKTDLSQFIKSLP-KGHRLIIVTPYNAKN-----------MSQVTTVRDYELSLMKKYNYITVADWYKVATEHPEIWGNTDGVHYSDSDTTGADLYVSNVKKAIQKSAQRAAK |
3DCI Chain:A ((23-230)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTVLAFGDSLTWGADPATGLRHPVEHRWPDVLEAELAGKAKVHPEGLGGRTTCYDDHAGPACRNGARALEVALSCHMPLDLVIIMLGTNDIKPVHGGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGPGGEPAGGRDIEQSMRLAPLYRKLAAE-LGHHFFDAGSVA----SA-SPVDGVHLDA-S--ATAAIGRALAAPVRDIL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82961 for 1228 contacts (-67.6/contact) +
2D Compatibility (PS) -16185 + (NN) -4259 + (LL) 36128
1D Compatibility (HY) -5600 + (ID) 1300
Total energy: -74177.0 ( -60.40 by residue)
QMean score : 0.493
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