Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNWNLDNFDNLHSSLAESAYNSRPNSFPELFETDSVTEVKFSQPSEDNKGQITQGGTNLPNDGIVYLQ--PDKSLKSIDENVKVRVPDVNGGYHSEHCVTNSYQKGY
3MJR Chain:B ((148-208))
------------------SVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQF-QSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLH
General information:
TITO was launched using:
RESULT:
Template:
3MJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2641 for 264 contacts (10.0/contact) +
2D Compatibility (PS) -6215 + (NN) -859 + (LL) 588
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -8345.0 ( -31.61 by residue)
QMean score : 0.242
(partial model without unconserved sides chains):
PDB file :
Tito_3MJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MJR-query.scw
PDB file :
Tito_Scwrl_3MJR.pdb
: