Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKKDSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
| 3GXR Chain:A ((38-76)) | ------------------------------------------TDAGRMEKYKSFINNVAKKHVVDPAVIAAIISRESRAGNVIFNTTPPGWGDNYNGFGLMQVDKRYHEPRGAWNSEEHIDQATGILVNFIQLIQKKFPSWSTEQQLKGAIAAYNTGDGRVESYESVDSRTTGKDYSNDVVARAQWYKKNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10031 for 216 contacts (-46.4/contact) +
2D Compatibility (PS) -4210 + (NN) -258 + (LL) 3808
1D Compatibility (HY) 0 + (ID) 400
Total energy: -11091.0 ( -51.35 by residue)
QMean score : 0.395
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