Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------MKNMMKYISE--LTTLIALAGLMVIITLINPNFLTTNN---LLNLLLQVTANGFIAFG-----MTFVILTGGIDLSVGSILALSSALT------AGLIGHGVPVGIAIVLSVALGGILGMLNGLFISYGKLAPFIVTLATMTIFRGATLVYSNGNPITAGLSDSFLFQFLGQGYIVGIPFPVILMF----LTFIILYILLHKTAFGKSVYALGGNEKAAY---ISGIKLNKVKIIIYTISGIMASISGLIITSRLSSAQPTAGASYEMDAIAAVVLGGTSLSGGKGRIIGTLIGAL--IIGVLNNGLNIIGVSAFWQQVVKGIVILMAVLLDRFKVAK------------------------------- |
1MIQ Chain:B ((76-327)) | TEHLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGH-------LSMPYKFIEVTDTDDLEPIYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145239 for 1813 contacts (-80.1/contact) +
2D Compatibility (PS) -26524 + (NN) 6222 + (LL) 760
1D Compatibility (HY) 12800 + (ID) 800
Total energy: -152781.0 ( -84.27 by residue)
QMean score : -0.006
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