Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHAWKELTFYKKKYLLIELLIIVMMFMVVFLSGLANGLGRAVSAAIENNPAQTYILNEGAEQVITSSVLTTKDQTDLNSLNLKDSTTLNIQR---SSLTRQGHEKKIDISYFAIDKDSFMAPTLSEGKQLTSYKKAIILNDSLKAEGIKLGDKVIDKSSSISLTVVGFVHNSMYGHGPVAFIDKD------IYTEINKKINPQYQFLPQALVMKNDKSISHLPTQLEAVS--KKDVIQHIPGYSAEQSTLNMILWVLVVASAGILGVFFYIITL---QKRHEFSVMK----------AIGTKMSEIALF-----QLSQVIIL--ALFGIIV--GDGLAIALS---YVLPA---QMPFVINWQNIILVSFVFLVIAMISSALSIVKVAKIDPVEVINGGGE---------- |
| 4ZOX Chain:A ((3-381)) | MSN--NSLTYFDKHTDSVFAIGHHPNLPLVCTGG-GDNLAHLWTSH-SQPPKFAGTLTGYGESVISCSF--TSEGGFLVTADMSGKVLVHMGQKGGAQWKLASQMQEVE-EIVWLKTHPTIARTFAFGAT----------DGSVWCYQIN------EQDGSLEQLMSGFVHQQDCSMGEFINTDKGENTLELVTCSLDSTIVAWNCFTGQQLFKITQAEIKGLEAPWISLSLAPETLTKGNSGVVACGSN-NGLLAVINCNNGGAILHLSTVIELKPEQDELDASIESISWSSKFSLMAIGLVCGEILLYDTSAWRVRHKFVLEDSVTKLMFDNDDLFASCINGKVYQFNARTGQEKFVCVGHNMGVLDFILL--------HPVANTGTEQKRKVITAGDEGVSLVFEVPN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108865 for 2689 contacts (-40.5/contact) +
2D Compatibility (PS) -33931 + (NN) 10619 + (LL) 3864
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -148113.0 ( -55.08 by residue)
QMean score : 0.043
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