Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHG-HYDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIV---GKGELAPIEDAKAMVE-TGIDFLAAGIGNIHGPYPANWEGLDLDH--LKKLTEAVPGFPIVLHGGSGIP---------------------DDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
| 1RVG Chain:B ((2-305)) | --LVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMKY-GGRALTLMAVELAKEA---RVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPF-IDHARLERIARLVPA-PLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIRE---ALNKNPKE------FDPRKYLGPAREAVKEVVKSRMELFGSVGRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115255 for 2451 contacts (-47.0/contact) +
2D Compatibility (PS) -31874 + (NN) -25031 + (LL) 1952
1D Compatibility (HY) -21200 + (ID) 6050
Total energy: -197458.0 ( -80.56 by residue)
QMean score : 0.645
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