Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MLIIELLKALFLGVVEGVTEWLPVSSTG--HLILVQE--FMKLNQSKSFVEMFNIVIQLGAIMA------------VIVIYFKRLNPFQPGKSAREIRLTWQ--------LWLKVVIACIPSILIALPFDNWFEAHFNFMIPIAIALIFYGFVFIWVEKRNAHLKP---QVTELASMSYKTAFLIGCFQVLSIVPGTSRSGATILGAIIIGTSRSVAADFTFFLAIPTMFGYS--GLKAVKYFLDGNVLSLDQSLI-------LLVASLTAFVVSLYVIRFLTDYVKRHD---FTIFGKYRIVLGSLLILY---WLVVHLF------- |
| 4V0N Chain:B ((36-425)) | VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEEQPLVATTVITCMDVVKQAIDEPD-AVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVR-LAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332529 for 2202 contacts (-151.0/contact) +
2D Compatibility (PS) -29485 + (NN) 9691 + (LL) 128
1D Compatibility (HY) -6400 + (ID) 2150
Total energy: -360745.0 ( -163.83 by residue)
QMean score : 0.065
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