Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKYILKRVAILLVTLWVVITLSFFLMQILPGTPYNNPKLTEEMIALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHKNDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPLSGWGTFSQTILPSLALGLPTLASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIFSIPGIGQQFVTSIPTKDYPVIMGTTIVYAVMLMVAILITDVVISIVDPRVRLQ |
4V0B Chain:A ((8-70)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQD--PKLLDNLLTKNVKVVGEP----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18295 for 399 contacts (-45.9/contact) +
2D Compatibility (PS) -6664 + (NN) -637 + (LL) 19420
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -8076.0 ( -20.24 by residue)
QMean score : 0.121
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