Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLNNDNDVFKAADIIKNQYG------INKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDVPYCLGGGCSLVLGKGEIVKPLPTLRPCWIVLVKPDFGISTKSIFRDIDCKSISR-VDIDLLKSAILSSDYQLMVKSMGNSLEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR
2WW4 Chain:A ((1-265))MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEG-VEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDP-PEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSND-----------CEVIARKRFREVDAVLSWLLE-Y-APSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNL


General information:
TITO was launched using:
RESULT:

Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123178 for 2141 contacts (-57.5/contact) +
2D Compatibility (PS) -27980 + (NN) -9003 + (LL) 1252
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -177959.0 ( -83.12 by residue)
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2WW4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WW4-query.scw
PDB file : Tito_Scwrl_2WW4.pdb: