Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLNNDNDVFKAADIIKNQYG------INKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDVPYCLGGGCSLVLGKGEIVKPLPTLRPCWIVLVKPDFGISTKSIFRDIDCKSISR-VDIDLLKSAILSSDYQLMVKSMGNSLEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR |
2WW4 Chain:A ((1-265)) | MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEG-VEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDP-PEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSND-----------CEVIARKRFREVDAVLSWLLE-Y-APSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123178 for 2141 contacts (-57.5/contact) +
2D Compatibility (PS) -27980 + (NN) -9003 + (LL) 1252
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -177959.0 ( -83.12 by residue)
QMean score : 0.459
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