Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNH-----DTTEIEIAMKRPYRYDYGQFTFLKIYQAGFESAAHPFSISGGHD-RVIFLTVKAS-----GDYTKSIYKQLKVGTKIALDRAYGHMLFDKD----KKEQVWIAGGIGITPFISFIRENSIL------------TKRVDFFYTFSNQDNLIYQDMLESYAKANP-NFKLHLNNSSLQG---RL-D-FSQ-------SVFEGQPTIFMCGPTSMTSTYAKVFRQKD---AKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 3JQQ Chain:A ((16-316)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYN--QRCARLYSISSSNNMENLSVAIKIHKYTNYGYCSGFIK-NLKINDDIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKMYPNNINIHYVFSYKQNTSFYVQDEIYKRKTEFLNLFNNYKCELYICGKKSIRYKVMDILKS--DEKKKKRVHVEVY------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154491 for 1609 contacts (-96.0/contact) +
2D Compatibility (PS) -22134 + (NN) -5476 + (LL) 22048
1D Compatibility (HY) -15200 + (ID) 2450
Total energy: -177703.0 ( -110.44 by residue)
QMean score : 0.534
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