Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTLIVNSHPDFSNPYSFTTILQEKFIELYNEHFPNHQLSILNLYDCVLPEITKEVLLSIWSKQRKGLELTA-DEIVQAKIS--KDLLEQFKSHHRIVFVSPMHNYNVTARAKTYIDNIFIAGETFKYTENGSVGLMTDDYRLLMLESAGSIYSKGQYSPYEFPVHYLKAIFKDFMAFDDFCVVRAEGTDILDRQVVLDKMNQDLREAFEAFYSKE
3W79 Chain:D ((5-199))
---LFITANPN-SAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAA-WGKFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLL-EGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVL-GFVGVNDTEYIAVEGMNANPEKA------QEIKEAAIANAREL
General information:
TITO was launched using:
RESULT:
Template:
3W79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104960 for 1390 contacts (-75.5/contact) +
2D Compatibility (PS) -20747 + (NN) -11065 + (LL) 1116
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -151756.0 ( -109.18 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3W79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W79-query.scw
PDB file :
Tito_Scwrl_3W79.pdb
: