Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEISLLTDIGQRRSNNQD--FINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSE-----IRDWMLVSIETENRKIYELGQSDDYKG-MGTTIEAVAIV----GDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVESEAV |
| 2J86 Chain:B ((1-240)) | MDVAGLTDCGLIRKSNQDAFYIDEKHQR----FFIVADGMGGHAGGEEASRLAV-DHIRQYLETHLEDLQHDPVTLLRQAFLAA----NHAIVEQQRQNSARADMGTT--AVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQ----TIEQARQHPWRHVLSQCLGREDLSQIDIQPIDLEPGDRLLLCSDGLTEELTD-DVISIYLSEPNVQKAAAALVDAAKTHGGRDNVTVVVISV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78824 for 1930 contacts (-40.8/contact) +
2D Compatibility (PS) -23727 + (NN) -7795 + (LL) 1776
1D Compatibility (HY) -14400 + (ID) 4000
Total energy: -126970.0 ( -65.79 by residue)
QMean score : 0.334
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