Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------MAKKDLTKIDRDLEEAKKKVADLENEKRQAEENLQKQIGKLYVQIQLKKDKSQSYETILDDLKTELELIKQEEKARREEAKNRQLTSSDEH-------------------------- |
3AJW Chain:A ((6-141)) | QHGALETLKDLAEKEVDDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRSNLNMGNGIASNRWINYQQFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQRLQAWQTLQDRQTAAALLAENRMDQKKMDEFA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 38325 for 489 contacts (78.4/contact) +
2D Compatibility (PS) -10413 + (NN) -7501 + (LL) 0
1D Compatibility (HY) -400 + (ID) 600
Total energy: 19411.0 ( 39.70 by residue)
QMean score : 0.613
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