Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYLSKLSDLDPSLMDADSEQIYIPKVLFEHNDFKGLTYKEILLYSFLLNRLREPLDFIQKGYDDNEDTYVHFKVEDLCELLNQSKTTVISLKKRLAQYGLIEEVKAGSHQPNRIYLTDKLVPYIKG
4PQL Chain:B ((18-114))
-----------------------IPKVFFTSENYKNLTNDMKIAYAILRDRLN--LSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
General information:
TITO was launched using:
RESULT:
Template:
4PQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46063 for 637 contacts (-72.3/contact) +
2D Compatibility (PS) -10401 + (NN) -3812 + (LL) 1492
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -69184.0 ( -108.61 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_4PQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PQL-query.scw
PDB file :
Tito_Scwrl_4PQL.pdb
: