Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTKKIPLRKSVVSGEVIDKRDLLRIVKNKEGQVFIDPTGKQNGRGAYIKLDNDEAILAKKKRVFDRSFSMEVSDEFYDELLAYVDHKVKRRELGLE |
1VQ8 Chain:U ((4-24)) | ---------RECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTAR------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1642 for 74 contacts (22.2/contact) +
2D Compatibility (PS) -2181 + (NN) 629 + (LL) 2840
1D Compatibility (HY) 0 + (ID) 200
Total energy: 2730.0 ( 36.89 by residue)
QMean score : 0.514
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