Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKRIKPNKKRELLKAKGINWKDVRLSQTLQEVASPKKKAPEAPKAVDLLEGLTANKQDVLKEAGLVSLEAFAKVSEADVLALKGIGPAAIKQLVDNGVVFAK
2I1Q Chain:A ((5-52))
----------------------------------------------LTDLPGVGPSTAEKLVEAGYIDFMKIATATVGELTDIEGISEKAAAKMIMGARDLCD
General information:
TITO was launched using:
RESULT:
Template:
2I1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31484 for 307 contacts (-102.6/contact) +
2D Compatibility (PS) -5104 + (NN) -1370 + (LL) 3308
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -37950.0 ( -123.62 by residue)
QMean score : 0.740
(partial model without unconserved sides chains):
PDB file :
Tito_2I1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I1Q-query.scw
PDB file :
Tito_Scwrl_2I1Q.pdb
: