Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGD-----------GSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF |
| 3OR1 Chain:B ((223-273)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCM-----------------------YCGNCYTMCPALPLSDGTGDGIAIMVGGKISNRIKVPSFSKVVVAFVPNEPPRWPTMAKIVKKIVEVYAEDARKYERIGDWIHRIGWETFYEKTGLEFSHHCIDDFRDPAYYTWRQSTQFKFVSFDS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23835 for 235 contacts (-101.4/contact) +
2D Compatibility (PS) -4243 + (NN) -1467 + (LL) 13972
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -18123.0 ( -77.12 by residue)
QMean score : 0.422
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