Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALAKIVYASMTGNTEEIADIVADKLRDLGLDVEVEECTMVDAAD-FEDADIAIVATYTYGDG--DLPDEIVDFYEDLAEVDLSGKVYGVVGSGDTFYDYFCKSVDEFEAQFALTGAQKGADCVKVDLAAEDEDIENLEAFAEEIASKLN
1C7F Chain:A ((3-126))
---ALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGESSYEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAI--
General information:
TITO was launched using:
RESULT:
Template:
1C7F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70702 for 957 contacts (-73.9/contact) +
2D Compatibility (PS) -13158 + (NN) -5454 + (LL) 848
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -97366.0 ( -101.74 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_1C7F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C7F-query.scw
PDB file :
Tito_Scwrl_1C7F.pdb
: