Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTLKLMFSFLLMLGTMFGISQTVLAQETHQLTIVHLEARDIDRPNPQLEIAPKEGTPI---EGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVF-EATTNQQGKATFNQLPDG-IYYGLAVKAGEKNR-NVSAFL----VDLSEDKVIYP------KIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTP-IR-------VKNG-------------------------------------------VHSQDI--D--AAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIGQAETAVTIEKSKTVTVTIENKKVPTPKVPSRGGLIPKTGEQQAMALVIIGGILIALALRLLSKHRKHQNKD |
| 2X9X Chain:A ((172-416)) | -------------------------------------------------------TGAPIPAGAEATFDLVNAQAG---------------------KVVQTVTLTTDKNTVTVNGLDKNTEYKFVER-SIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVNDKD---NRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTATSYSATGQGIEYTAGSGKDDATKVVN----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15006 for 895 contacts (-16.8/contact) +
2D Compatibility (PS) -17379 + (NN) 2332 + (LL) 8768
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: -27285.0 ( -30.49 by residue)
QMean score : 0.415
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