Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTALNIPFTVEGIENYYQNIKMILSLADKWSIPKDDLLLFLKGLKAIDDIKVGSPIFKYFWTSLSLQAP--LKALEFVL----EQAKMPTELSGELSETQYLVAQFSDELAPHDDFWIALSQVIYDSFPGNSLAEDTVLNRKLHQFRYLISSQQAQYVRRYFKDVGMTDRDALVNYLSCLREPDNIAYYESARLHNKRRRNGEIFAFPDDEPVINSKLLISFHTEFIIDDKGNFLNEIDAEVITSNGIINGASFNYAFKNNTRHKELDVDPVKLDP-KFRNDMTRGYRSPNLSRRKWFFFKEEDYDCSYFNKKGYYAFGRRSAKQSVDKQVKYLKKAVQKMRLN |
| 3WZM Chain:A ((15-278)) | --MRTRSTISTPNGITWYYEQEG-----------TGPDVVLVPDGLGE----------CQMFDSSVSQIAAQGFRVTTFDMPGMSRSAKAPPETYTEVT-AQKLASYVISVLDALD---IKHATVWGCASGASTVVA--LLLGYPDRIRNAMCHELPTKLLDHLSNTAVLEDEEISKILANVMLND---------------VSGGSEAWQA----MGDEVHARLHKNYPVWARGYPRTIPPSAPVKDLEALRGKPLDWTVGAATPTESFFDNIVTATKAGVNIGLLPGMHFPYVSH--------------------------------PDVFAKYVVETTQKHL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13258 for 2265 contacts (-5.9/contact) +
2D Compatibility (PS) -26410 + (NN) 2641 + (LL) 5388
1D Compatibility (HY) -4800 + (ID) 2200
Total energy: -38639.0 ( -17.06 by residue)
QMean score : 0.198
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