Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEFTFEIVEKLLVLSENEKGWTKELNRVSFNGA--PAKFDLRTWSPDHTKMGKGITLSNEEFKVILDAFRK
3ZDS Chain:A ((258-282))
------------------------PLDVVAWHGSNVPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHG
General information:
TITO was launched using:
RESULT:
Template:
3ZDS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -705 for 48 contacts (-14.7/contact) +
2D Compatibility (PS) -2163 + (NN) 910 + (LL) 2252
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -2506.0 ( -52.21 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3ZDS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZDS-query.scw
PDB file :
Tito_Scwrl_3ZDS.pdb
: