Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTL---STVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
3UWV Chain:B ((10-261))
--RTPIIAGNWKMNKTVQEAKDFVNALPT-LPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
General information:
TITO was launched using:
RESULT:
Template:
3UWV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110787 for 2127 contacts (-52.1/contact) +
2D Compatibility (PS) -27610 + (NN) -15456 + (LL) 244
1D Compatibility (HY) -21600 + (ID) 7450
Total energy: -182659.0 ( -85.88 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_3UWV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWV-query.scw
PDB file :
Tito_Scwrl_3UWV.pdb
: