Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQ-SDTIFEKCFEIIQVYHYLTKKNLLVF--------------VNS---------GAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV |
| 2GJX Chain:A ((143-233)) | --------------------------------------------------------------------------------------------------------------------------------PRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42123 for 383 contacts (-110.0/contact) +
2D Compatibility (PS) -6550 + (NN) 959 + (LL) 10896
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -40968.0 ( -106.97 by residue)
QMean score : 0.467
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