Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEPISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
1UWZ Chain:B ((1-125))
MNRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEATALFKAVSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKDVIVVLTNLQGQIKEMTVEELLPGAFSSED
General information:
TITO was launched using:
RESULT:
Template:
1UWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54450 for 1026 contacts (-53.1/contact) +
2D Compatibility (PS) -13725 + (NN) -6572 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3300
Total energy: -87647.0 ( -85.43 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1UWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWZ-query.scw
PDB file :
Tito_Scwrl_1UWZ.pdb
: