Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEMKHSYKRYQTGETEIVANNDISFSIERGELVVILGASGAGKSTVLNILGGMDSNSEGEVLIDGKNIAN-YTIRELTRYRRYDVGFVFQFYNLVPNLTALENVELASEIV---PKALDAQQALE---NVGLGHRINHFPAQLSGGEQQRVAIARAIAKKPKLLLCDEPTGALDYQTGKQVLAILQKMAQSKETTVIIVTHNTALA-PIANRVIHMHDSKISDIVINENPSDIQNIEY
4U02 Chain:D ((23-218))
-------------------------IHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKDDRALREIRR----EVGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGG-MTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEER
General information:
TITO was launched using:
RESULT:
Template:
4U02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109626 for 1474 contacts (-74.4/contact) +
2D Compatibility (PS) -21065 + (NN) -11790 + (LL) 2268
1D Compatibility (HY) -19600 + (ID) 4200
Total energy: -164013.0 ( -111.27 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_4U02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U02-query.scw
PDB file :
Tito_Scwrl_4U02.pdb
: