Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKCPIIALDFSDLASVTTFLEHF-PKEELLFVKIGMELYYSEGPSIIRYIKSLGHRIFLDLKLHDIPNTVRSSMSVLAKLGIDMTNVHAAGGVEMMKAAREGL----GEGPILLAVTQLTSTSQEQMQVDQHINLSVVDSVCHYAQKAQEAGLDGVVASAQEVKQIKKQTNEHFICLTPGIRPPQTNQLDDQKRTMTPEQARIVGADYIVVGRPITKAENPYQAYLEIKEEWNRIK
1EIX Chain:D ((18-242))
------VVALDYHNRDDALAFVDKIDPRDCRL--KVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDL-VDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIR-PQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ---
General information:
TITO was launched using:
RESULT:
Template:
1EIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122263 for 1880 contacts (-65.0/contact) +
2D Compatibility (PS) -23680 + (NN) -9831 + (LL) 1140
1D Compatibility (HY) -13200 + (ID) 4800
Total energy: -172634.0 ( -91.83 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1EIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EIX-query.scw
PDB file :
Tito_Scwrl_1EIX.pdb
: